Correlation

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Example correlation plot

Generate heatmaps or cluster dendrograms showing the correlations between transcriptional profiles of all the samples in a given project.

The options for correlation are as follows:

correlation Options
Set The project you would like to analyze.
Plot Type Choose heatmap to show all-versus-all pairwise correlations as a heatmap. Choose cluster to

show a dendrogram representing the hierarchical clustering based on pairwise correlations.

width Width of the image in pixels
height Height of the image in pixels